BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028F02LP1|AL428932
(921 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1380 1815 0.0
>3x_Contig1380
Length = 6718
Score = 1815 bits (913), Expect = 0.0
Identities = 917/921 (99%)
Strand = Plus / Plus
Query: 1 acaatccaagatccggtaacaattgtaccttggactttcaagagagaccaattttgctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3401 acaatccaagatccggtaacaattgtaccttggactttcaagagagaccaattttgctgc 3460
Query: 61 caaacgaaaacactgcatcggaactgtacattagatcagattcgccgatgaataaatacg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3461 caaacgaaaacactgcatcggaactgtacattagatcagattcgccgatgaataaatacg 3520
Query: 121 aagtacccattccattacaaatccacttaccgccatatctttctcctgataataagaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3521 aagtacccattccattacaaatccacttaccgccatatctttctcctgataataagaata 3580
Query: 181 agaggagaaatagcttggtgttcgatggtgatggttactccgtgtatttgggagatggcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3581 agaggagaaatagcttggtgttcgatggtgatggttactccgtgtatttgggagatggcg 3640
Query: 241 actcggatgcttcaagttcttcagatacgcaggattatttgcagaattatgtggaagaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3641 actcggatgcttcaagttcttcagatacgcaggattatttgcagaattatgtggaagaaa 3700
Query: 301 gtgatgtatctattccttcggcagataataacttgtctttcaatgttagtgatgatgatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3701 gtgatgtatctattccttcggcagataataacttgtctttcaatgttagtgatgatgatg 3760
Query: 361 ttgatgctaagttaggtattgatgaagatgccaatgttgacttaaagaaacaagtccgga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3761 ttgatgctaagttaggtattgatgaagatgccaatgttgacttaaagaaacaagtccgga 3820
Query: 421 acttgaagaagagttcaacacatcactcaaaaccagcgttaaataaaacattacctgama 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 3821 acttgaagaagagttcaacacatcactcaaaaccagcgttaaataaaacattacctgaaa 3880
Query: 481 ttgagatccaaaacccggaagctaagttagtcaaaagtaatgcattaamaatccttgcma 540
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 3881 ttgagatccaaaacccggaagctaagttagtcaaaagtaatgcattaaaaatccttgcaa 3940
Query: 541 cgccgacgaaagamattaccattccagcaattgaagacatacctagaccaactacaaaga 600
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3941 cgccgacgaaagaaattaccattccagcaattgaagacatacctagaccaactacaaaga 4000
Query: 601 acggaacattggcattctttaatagctttacggaatctaaagagcagatatcgtcgaaga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4001 acggaacattggcattctttaatagctttacggaatctaaagagcagatatcgtcgaaga 4060
Query: 661 actcggaatgtcccgcaaagaatgaaccgaatctgaatttcaaatttcctccaaactctg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4061 actcggaatgtcccgcaaagaatgaaccgaatctgaatttcaaatttcctccaaactctg 4120
Query: 721 aagttccaaatgatgataataactttttaaagacttctgcggacccttcgaatgcagaca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4121 aagttccaaatgatgataataactttttaaagacttctgcggacccttcgaatgcagaca 4180
Query: 781 tagaaagaagaaggcaaatgctgcggcagaatatgggccctcgatctcatgcccataaaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4181 tagaaagaagaaggcaaatgctgcggcagaatatgggccctcgatctcatgcccataaaa 4240
Query: 841 ggtcgagaagtattcataatgggacagacatgtttgtgacaatgtctcccgtgaatgaca 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4241 ggtcgagaagtattcataatgggacagacatgtttgtgacaatgtctcccgtgaatgaca 4300
Query: 901 tacacactcaggaagaaagca 921
|||||||||||||||||||||
Sbjct: 4301 tacacactcaggaagaaagca 4321
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7359
Number of Sequences: 1807
Number of extensions: 7359
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 921
length of database: 10,358,551
effective HSP length: 16
effective length of query: 905
effective length of database: 10,329,639
effective search space: 9348323295
effective search space used: 9348323295
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)